Update README.md

MPI/elegant/README.md

@@ -30,10 +30,12 @@ Instructions to build [`Pelegant`](https://ops.aps.anl.gov/publish/Pelegant_manu
 
 ### Initialize environment
 
+```
 SDDS_VERSION=5.1
 ELEGANT_VERSION=2021.4.0
+ELEGANT_RELEASE=-1
 DOWNLOAD_DIR="/opt/psi/var/distfiles/elegant"
-
+```
 With OpenMPI not optimized for Merlin/SLURM:
 ```
 module load gcc/10.3.0 gsl/2.7 lapack/3.10.0 openmpi/4.0.5
@@ -45,11 +47,12 @@ module load gcc/10.3.0 gsl/2.7 lapack/3.10.0 openmpi/4.0.5-1_slurm
 USE_FLAGS="_slurm"
 ```
 
-PREFIX="${PMODULES_ROOT}/MPI/elegant/${ELEGANT_VERSION}${USE_FLAGS}/${MPI}/${MPI_VERSION}/${COMPILER}/${COMPILER_VERSION}"
+```
+PREFIX="${PMODULES_ROOT}/MPI/elegant/${ELEGANT_VERSION}${ELEGANT_RELEASE}${USE_FLAGS}/${MPI}/${MPI_VERSION}/${COMPILER}/${COMPILER_VERSION}"
+```
 
 ### Setup Environment
 ```
-
 export EPICS_BASE="${PREFIX}/epics/base"
 export HOST_ARCH=linux-x86_64
 export EPICS_HOST_ARCH=linux-x86_64
@@ -83,11 +86,13 @@ tar xvf "${DOWNLOAD_DIR}/elegant.${ELEGANT_VERSION}.tar.gz"
 ### Configure EPICS base and OAG applications
 
 ```
-cd epics/base
+cd "${PREFIX}/epics/base"
 make "${ARGS[@]}"
 cd "${PREFIX}/oag/apps/configure"
 sed -i "s/clean::/clean:/" RULES_PYTHON
 make "${ARGS[@]}"
+cd "${PREFIX}/oag/apps/src/physics"
+make "${ARGS[@]}"
 ```
 
 ### Compile SDDS 5.1
@@ -214,6 +219,7 @@ make "${ARGS[@]}" MPI=1 -C SDDSlib
 ```
 cd "${PREFIX}/oag/apps/src/elegant"
 make "${ARGS[@]}" STATIC_BUILD=NO
+make "${ARGS[@]}" -C elegantTools
 ```
 
 ### Compile Pelegant